J3_6W6P_037
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 6W6P|1|a|U|1198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6W6P_037 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.115
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6W6P|1|a|U|1132
6W6P|1|a|A|1133
6W6P|1|a|U|1134
*
6W6P|1|a|A|1170
6W6P|1|a|G|1171
6W6P|1|a|A|1172
6W6P|1|a|C|1173
6W6P|1|a|U|1174
6W6P|1|a|G|1175
6W6P|1|a|C|1176
*
6W6P|1|a|G|1190
6W6P|1|a|A|1191
6W6P|1|a|G|1192
6W6P|1|a|G|1193
6W6P|1|a|A|1194
6W6P|1|a|A|1195
6W6P|1|a|G|1196
6W6P|1|a|G|1197
6W6P|1|a|U|1198
6W6P|1|a|G|1199
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: