3D structure

PDB id
6W77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Inactivated-high-Mg2+ Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGG*CUUG*CG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6W77_002 not in the Motif Atlas
Homologous match to J3_5J7L_002
Geometric discrepancy: 0.1447
The information below is about J3_5J7L_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_56052.5
Basepair signature
cWW-F-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

6W77|1|A|C|586
6W77|1|A|G|587
6W77|1|A|G|588
*
6W77|1|A|C|651
6W77|1|A|U|652
6W77|1|A|U|653
6W77|1|A|G|654
*
6W77|1|A|C|754
6W77|1|A|G|755

Current chains

Chain A
RNA (1519-MER)

Nearby chains

Chain H
30S ribosomal protein S8
Chain L
30S ribosomal protein S12
Chain O
30S ribosomal protein S15
Chain Q
30S ribosomal protein S17

Coloring options:


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