J3_6W7M_007

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUUAAUUC*GAAGAACCUUAC*GGCUA

Length

25 nucleotides

Bulged bases

6W7M|1|A|A|975, 6W7M|1|A|G|976, 6W7M|1|A|A|978

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6W7M_007 not in the Motif Atlas

Homologous match to J3_5J7L_006

Geometric discrepancy: 0.2094

The information below is about J3_5J7L_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_83516.4

Basepair signature

cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6W7M|1|A|U|955
6W7M|1|A|U|956
6W7M|1|A|U|957
6W7M|1|A|A|958
6W7M|1|A|A|959
6W7M|1|A|U|960
6W7M|1|A|U|961
6W7M|1|A|C|962
*
6W7M|1|A|G|973
6W7M|1|A|A|974
6W7M|1|A|A|975
6W7M|1|A|G|976
6W7M|1|A|A|977
6W7M|1|A|A|978
6W7M|1|A|C|979
6W7M|1|A|C|980
6W7M|1|A|U|981
6W7M|1|A|U|982
6W7M|1|A|A|983
6W7M|1|A|C|984
*
6W7M|1|A|G|1221
6W7M|1|A|G|1222
6W7M|1|A|C|1223
6W7M|1|A|U|1224
6W7M|1|A|A|1225

Current chains

Chain A

16S rRNA

Nearby chains

Chain J

30S ribosomal protein S10

Chain M

30S ribosomal protein S13

Chain N

30S ribosomal protein S14

Chain S

30S ribosomal protein S19