J3_6WDI_029

3D structure

PDB id

6WDI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGAAGC*GCGCGAUACAG*CGUAC

Length

22 nucleotides

Bulged bases

6WDI|1|1|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDI|1|1|G|297
6WDI|1|1|G|298
6WDI|1|1|A|299
6WDI|1|1|A|300
6WDI|1|1|G|301
6WDI|1|1|C|302
*
6WDI|1|1|G|315
6WDI|1|1|C|316
6WDI|1|1|G|317
6WDI|1|1|C|318
6WDI|1|1|G|319
6WDI|1|1|A|320
6WDI|1|1|U|321
6WDI|1|1|A|322
6WDI|1|1|C|323
6WDI|1|1|A|324
6WDI|1|1|G|325
*
6WDI|1|1|C|337
6WDI|1|1|G|338
6WDI|1|1|U|339
6WDI|1|1|A|340
6WDI|1|1|C|341

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L4

Chain u

50S ribosomal protein L24