J3_6WNT_018
3D structure
- PDB id
- 6WNT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit without free 5S rRNA and perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGCUGCUC*GUAAAAC*GGAAGAUGUAACGGGGC
- Length
- 33 nucleotides
- Bulged bases
- 6WNT|1|4|C|1030, 6WNT|1|4|A|1255, 6WNT|1|4|U|1258
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WNT|1|4|G|1024
6WNT|1|4|G|1025
6WNT|1|4|G|1026
6WNT|1|4|C|1027
6WNT|1|4|U|1028
6WNT|1|4|G|1029
6WNT|1|4|C|1030
6WNT|1|4|U|1031
6WNT|1|4|C|1032
*
6WNT|1|4|G|1152
6WNT|1|4|U|1153
6WNT|1|4|A|1154
6WNT|1|4|A|1155
6WNT|1|4|A|1156
6WNT|1|4|A|1157
6WNT|1|4|C|1158
*
6WNT|1|4|G|1252
6WNT|1|4|G|1253
6WNT|1|4|A|1254
6WNT|1|4|A|1255
6WNT|1|4|G|1256
6WNT|1|4|A|1257
6WNT|1|4|U|1258
6WNT|1|4|G|1259
6WNT|1|4|U|1260
6WNT|1|4|A|1261
6WNT|1|4|A|1262
6WNT|1|4|C|1263
6WNT|1|4|G|1264
6WNT|1|4|G|1265
6WNT|1|4|G|1266
6WNT|1|4|G|1267
6WNT|1|4|C|1268
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L36
- Chain c
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L13
Coloring options: