J3_6WNW_027
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 6WNW|1|4|U|2961, 6WNW|1|4|A|2963
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6WNW_027 not in the Motif Atlas
- Geometric match to J3_5J7L_048
- Geometric discrepancy: 0.1623
- The information below is about J3_5J7L_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_64069.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
6WNW|1|4|G|2940
6WNW|1|4|A|2941
6WNW|1|4|A|2942
6WNW|1|4|C|2943
*
6WNW|1|4|G|2959
6WNW|1|4|U|2960
6WNW|1|4|U|2961
6WNW|1|4|G|2962
6WNW|1|4|A|2963
6WNW|1|4|U|2964
*
6WNW|1|4|A|3010
6WNW|1|4|A|3011
6WNW|1|4|U|3012
6WNW|1|4|G|3013
6WNW|1|4|A|3014
6WNW|1|4|A|3015
6WNW|1|4|C|3016
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L3
- Chain n
- 50S ribosomal protein L17
- Chain s
- 50S ribosomal protein L22
Coloring options: