J3_6WOO_019
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACGG*CCGCUAAGG*CAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WOO|1|5|G|1230
6WOO|1|5|A|1231
6WOO|1|5|C|1232
6WOO|1|5|G|1233
6WOO|1|5|G|1234
*
6WOO|1|5|C|1254
6WOO|1|5|C|1255
6WOO|1|5|G|1256
6WOO|1|5|C|1257
6WOO|1|5|U|1258
6WOO|1|5|A|1259
6WOO|1|5|A|1260
6WOO|1|5|G|1261
6WOO|1|5|G|1262
*
6WOO|1|5|C|1277
6WOO|1|5|A|1278
6WOO|1|5|C|1279
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain K
- L10
- Chain r
- uL10
Coloring options: