J3_6WOO_029
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCAUAU*AGC*GUG
- Length
- 12 nucleotides
- Bulged bases
- 6WOO|1|7|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WOO|1|7|C|9
6WOO|1|7|C|10
6WOO|1|7|A|11
6WOO|1|7|U|12
6WOO|1|7|A|13
6WOO|1|7|U|14
*
6WOO|1|7|A|66
6WOO|1|7|G|67
6WOO|1|7|C|68
*
6WOO|1|7|G|110
6WOO|1|7|U|111
6WOO|1|7|G|112
Current chains
- Chain 7
- 5S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- uL18
- Chain I
- uL16
- Chain T
- eL21
Coloring options: