J3_6WOO_033
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGGUG*UGUC*GAUAACGA
- Length
- 17 nucleotides
- Bulged bases
- 6WOO|1|2|A|1321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WOO|1|2|U|1290
6WOO|1|2|G|1291
6WOO|1|2|G|1292
6WOO|1|2|U|1293
6WOO|1|2|G|1294
*
6WOO|1|2|U|1303
6WOO|1|2|G|1304
6WOO|1|2|U|1305
6WOO|1|2|C|1306
*
6WOO|1|2|G|1318
6WOO|1|2|A|1319
6WOO|1|2|U|1320
6WOO|1|2|A|1321
6WOO|1|2|A|1322
6WOO|1|2|C|1323
6WOO|1|2|G|1324
6WOO|1|2|A|1325
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AA
- uS2
- Chain CC
- uS5
- Chain DD
- uS3
- Chain RR
- eS17
Coloring options: