J3_6WRU_015
3D structure
- PDB id
- 6WRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCGGGUC*GAUAA*UA
- Length
- 14 nucleotides
- Bulged bases
- 6WRU|1|1|C|1382, 6WRU|1|1|A|1421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6WRU_015 not in the Motif Atlas
- Homologous match to J3_7A0S_018
- Geometric discrepancy: 0.1244
- The information below is about J3_7A0S_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94309.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
6WRU|1|1|U|1381
6WRU|1|1|C|1382
6WRU|1|1|G|1383
6WRU|1|1|G|1384
6WRU|1|1|G|1385
6WRU|1|1|U|1386
6WRU|1|1|C|1387
*
6WRU|1|1|G|1418
6WRU|1|1|A|1419
6WRU|1|1|U|1420
6WRU|1|1|A|1421
6WRU|1|1|A|1422
*
6WRU|1|1|U|1439
6WRU|1|1|A|1440
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L23
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