J3_6XA1_003
3D structure
- PDB id
- 6XA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a drug-like compound stalled human translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CC*GAGGGAGCGAGACCCGUCGCCG*CACGGGG
- Length
- 31 nucleotides
- Bulged bases
- 6XA1|1|L5|G|952, 6XA1|1|L5|C|954, 6XA1|1|L5|C|955, 6XA1|1|L5|C|956, 6XA1|1|L5|U|958, 6XA1|1|L5|C|1267
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XA1|1|L5|C|703
6XA1|1|L5|C|704
*
6XA1|1|L5|G|942
6XA1|1|L5|A|943
6XA1|1|L5|G|944
6XA1|1|L5|G|945
6XA1|1|L5|G|946
6XA1|1|L5|A|947
6XA1|1|L5|G|948
6XA1|1|L5|C|949
6XA1|1|L5|G|950
6XA1|1|L5|A|951
6XA1|1|L5|G|952
6XA1|1|L5|A|953
6XA1|1|L5|C|954
6XA1|1|L5|C|955
6XA1|1|L5|C|956
6XA1|1|L5|G|957
6XA1|1|L5|U|958
6XA1|1|L5|C|959
6XA1|1|L5|G|960
6XA1|1|L5|C|961
6XA1|1|L5|C|962
6XA1|1|L5|G|963
*
6XA1|1|L5|C|1265
6XA1|1|L5|A|1266
6XA1|1|L5|C|1267
6XA1|1|L5|G|1268
6XA1|1|L5|G|1269
6XA1|1|L5|G|1270
6XA1|1|L5|G|1271
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LE
- 60S ribosomal protein L6
- Chain LF
- 60S ribosomal protein L7
- Chain Le
- 60S ribosomal protein L32
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