J3_6XA1_031

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAAG*CCCCGUGGAC*GGUAG

Length

19 nucleotides

Bulged bases

6XA1|1|L5|U|221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|C|193
6XA1|1|L5|A|194
6XA1|1|L5|A|195
6XA1|1|L5|G|196
*
6XA1|1|L5|C|212
6XA1|1|L5|C|217
6XA1|1|L5|C|218
6XA1|1|L5|C|219
6XA1|1|L5|G|220
6XA1|1|L5|U|221
6XA1|1|L5|G|222
6XA1|1|L5|G|223
6XA1|1|L5|A|224
6XA1|1|L5|C|225
*
6XA1|1|L5|G|237
6XA1|1|L5|G|238
6XA1|1|L5|U|239
6XA1|1|L5|A|240
6XA1|1|L5|G|241

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26