J3_6XE0_008
3D structure
- PDB id
- 6XE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CUUG*CAG*CUUACG
- Length
- 13 nucleotides
- Bulged bases
- 6XE0|1|W|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6XE0_008 not in the Motif Atlas
- Homologous match to J3_5J7L_007
- Geometric discrepancy: 0.2083
- The information below is about J3_5J7L_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82572.1
- Basepair signature
- cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6XE0|1|W|C|990
6XE0|1|W|U|991
6XE0|1|W|U|992
6XE0|1|W|G|993
*
6XE0|1|W|C|1045
6XE0|1|W|A|1046
6XE0|1|W|G|1047
*
6XE0|1|W|C|1210
6XE0|1|W|U|1211
6XE0|1|W|U|1212
6XE0|1|W|A|1213
6XE0|1|W|C|1214
6XE0|1|W|G|1215
Current chains
- Chain W
- 16s rRNA
Nearby chains
- Chain M
- 30S ribosomal protein S14
Coloring options: