J3_6XIQ_008
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GUC*GCCUAUCGAUCCUUU*AGAGGUGCC
- Length
- 27 nucleotides
- Bulged bases
- 6XIQ|1|1|U|2757, 6XIQ|1|1|C|2764, 6XIQ|1|1|U|2767, 6XIQ|1|1|C|2797
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|G|2651
6XIQ|1|1|U|2652
6XIQ|1|1|C|2653
*
6XIQ|1|1|G|2754
6XIQ|1|1|C|2755
6XIQ|1|1|C|2756
6XIQ|1|1|U|2757
6XIQ|1|1|A|2758
6XIQ|1|1|U|2759
6XIQ|1|1|C|2760
6XIQ|1|1|G|2761
6XIQ|1|1|A|2762
6XIQ|1|1|U|2763
6XIQ|1|1|C|2764
6XIQ|1|1|C|2765
6XIQ|1|1|U|2766
6XIQ|1|1|U|2767
6XIQ|1|1|U|2768
*
6XIQ|1|1|A|2790
6XIQ|1|1|G|2791
6XIQ|1|1|A|2792
6XIQ|1|1|G|2793
6XIQ|1|1|G|2794
6XIQ|1|1|U|2795
6XIQ|1|1|G|2796
6XIQ|1|1|C|2797
6XIQ|1|1|C|2798
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain Q
- 60S ribosomal protein L18-A
- Chain T
- 60S ribosomal protein L21-A
- Chain a
- 60S ribosomal protein L28
- Chain o
- 60S ribosomal protein L42-A
Coloring options: