J3_6XIQ_030
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GGUGAACUAU*AUAG*CGAACC
- Length
- 20 nucleotides
- Bulged bases
- 6XIQ|1|1|A|817, 6XIQ|1|1|U|905, 6XIQ|1|1|G|924, 6XIQ|1|1|A|925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|G|812
6XIQ|1|1|G|813
6XIQ|1|1|U|814
6XIQ|1|1|G|815
6XIQ|1|1|A|816
6XIQ|1|1|A|817
6XIQ|1|1|C|818
6XIQ|1|1|U|819
6XIQ|1|1|A|820
6XIQ|1|1|U|821
*
6XIQ|1|1|A|904
6XIQ|1|1|U|905
6XIQ|1|1|A|906
6XIQ|1|1|G|907
*
6XIQ|1|1|C|923
6XIQ|1|1|G|924
6XIQ|1|1|A|925
6XIQ|1|1|A|926
6XIQ|1|1|C|927
6XIQ|1|1|C|928
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain C
- RPL4A isoform 1
- Chain N
- 60S ribosomal protein L15-A
- Chain j
- 60S ribosomal protein L37-A
Coloring options: