J3_6Y0G_001

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

6Y0G|1|L5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|L5|C|112
6Y0G|1|L5|A|113
6Y0G|1|L5|G|114
6Y0G|1|L5|C|115
6Y0G|1|L5|G|116
*
6Y0G|1|L5|C|155
6Y0G|1|L5|G|156
6Y0G|1|L5|U|157
6Y0G|1|L5|A|158
6Y0G|1|L5|C|159
6Y0G|1|L5|G|160
*
6Y0G|1|L5|C|275
6Y0G|1|L5|C|276
6Y0G|1|L5|G|277
6Y0G|1|L5|G|278

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LG

60S ribosomal protein L7a

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Li

60S ribosomal protein L36