J3_6YDP_013
3D structure
- PDB id
- 6YDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UU*AA*UAACCAUAACA
- Length
- 15 nucleotides
- Bulged bases
- 6YDP|1|BA|U|1218, 6YDP|1|BA|C|1221
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YDP|1|BA|U|1186
6YDP|1|BA|U|1187
*
6YDP|1|BA|A|1190
6YDP|1|BA|A|1191
*
6YDP|1|BA|U|1212
6YDP|1|BA|A|1213
6YDP|1|BA|A|1214
6YDP|1|BA|C|1215
6YDP|1|BA|C|1216
6YDP|1|BA|A|1217
6YDP|1|BA|U|1218
6YDP|1|BA|A|1219
6YDP|1|BA|A|1220
6YDP|1|BA|C|1221
6YDP|1|BA|A|1222
Current chains
- Chain BA
- 12S rRNA
Nearby chains
- Chain B0
- Mitochondrial ribosomal protein L27
- Chain B6
- bL33m
- Chain B8
- Mitochondrial ribosomal protein L35
- Chain BS
- Mitochondrial ribosomal protein L18
- Chain Bu
- mL62 (ICT1)
- Chain Bv
- mL64
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