J3_6YLY_011
3D structure
- PDB id
- 6YLY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-60S State NE2 (TAP-Flag-Nop53)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GACUG*CAUAGC*GUGAUUUAUGGAUUAAC
- Length
- 28 nucleotides
- Bulged bases
- 6YLY|1|1|U|2314
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YLY|1|1|G|2130
6YLY|1|1|A|2131
6YLY|1|1|C|2132
6YLY|1|1|U|2133
6YLY|1|1|G|2134
*
6YLY|1|1|C|2146
6YLY|1|1|A|2147
6YLY|1|1|U|2148
6YLY|1|1|A|2149
6YLY|1|1|G|2150
6YLY|1|1|C|2151
*
6YLY|1|1|G|2185
6YLY|1|1|U|2186
6YLY|1|1|G|2187
6YLY|1|1|A|2188
6YLY|1|1|U|2189
6YLY|1|1|U|2190
6YLY|1|1|U|2191
6YLY|1|1|A|2313
6YLY|1|1|U|2314
6YLY|1|1|G|2315
6YLY|1|1|G|2316
6YLY|1|1|A|2317
6YLY|1|1|U|2318
6YLY|1|1|U|2319
6YLY|1|1|A|2320
6YLY|1|1|A|2321
6YLY|1|1|C|2322
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L43-A
Coloring options: