J3_6YTF_007
3D structure
- PDB id
- 6YTF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUU*AUAC*GGCG
- Length
- 11 nucleotides
- Bulged bases
- 6YTF|1|3|C|1180
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6YTF_007 not in the Motif Atlas
- Homologous match to J3_5J7L_010
- Geometric discrepancy: 0.1412
- The information below is about J3_5J7L_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.4
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6YTF|1|3|U|1113
6YTF|1|3|U|1114
6YTF|1|3|U|1115
*
6YTF|1|3|A|1152
6YTF|1|3|U|1153
6YTF|1|3|A|1154
6YTF|1|3|C|1155
*
6YTF|1|3|G|1178
6YTF|1|3|G|1179
6YTF|1|3|C|1180
6YTF|1|3|G|1181
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14
Coloring options: