J3_6Z6L_009

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

6Z6L|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|A|2551
6Z6L|1|L5|G|2552
6Z6L|1|L5|A|2553
6Z6L|1|L5|U|2554
6Z6L|1|L5|G|2555
*
6Z6L|1|L5|C|2572
6Z6L|1|L5|A|2573
6Z6L|1|L5|G|2574
6Z6L|1|L5|U|2575
*
6Z6L|1|L5|A|2757
6Z6L|1|L5|G|2758
6Z6L|1|L5|G|2759
6Z6L|1|L5|G|2760
6Z6L|1|L5|U|2761
6Z6L|1|L5|G|2762
6Z6L|1|L5|U|2763
6Z6L|1|L5|A|2764
6Z6L|1|L5|A|2765
6Z6L|1|L5|A|2766
6Z6L|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27