J3_6ZM5_008

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

6ZM5|1|AA|A|688, 6ZM5|1|AA|C|828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZM5|1|AA|G|687
6ZM5|1|AA|A|688
6ZM5|1|AA|U|689
6ZM5|1|AA|U|690
*
6ZM5|1|AA|A|823
6ZM5|1|AA|U|824
6ZM5|1|AA|U|825
6ZM5|1|AA|A|826
6ZM5|1|AA|A|827
6ZM5|1|AA|C|828
6ZM5|1|AA|C|829
6ZM5|1|AA|U|830
*
6ZM5|1|AA|A|856
6ZM5|1|AA|G|857
6ZM5|1|AA|C|858

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial