J3_6ZM5_012

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

6ZM5|1|AA|U|1229, 6ZM5|1|AA|C|1230, 6ZM5|1|AA|A|1232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZM5|1|AA|U|1210
6ZM5|1|AA|G|1211
6ZM5|1|AA|U|1212
6ZM5|1|AA|A|1213
6ZM5|1|AA|A|1214
6ZM5|1|AA|U|1215
6ZM5|1|AA|C|1216
*
6ZM5|1|AA|G|1227
6ZM5|1|AA|A|1228
6ZM5|1|AA|U|1229
6ZM5|1|AA|C|1230
6ZM5|1|AA|A|1231
6ZM5|1|AA|A|1232
6ZM5|1|AA|C|1233
6ZM5|1|AA|C|1234
6ZM5|1|AA|U|1235
6ZM5|1|AA|C|1236
6ZM5|1|AA|A|1237
6ZM5|1|AA|C|1238
*
6ZM5|1|AA|G|1351
6ZM5|1|AA|C|1352
6ZM5|1|AA|A|1353
6ZM5|1|AA|A|1354

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain w

Transfer RNA; tRNA