J3_6ZM5_020

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

6ZM5|1|AA|U|1369, 6ZM5|1|AA|C|1385, 6ZM5|1|AA|U|1386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZM5|1|AA|C|1366
6ZM5|1|AA|A|1367
6ZM5|1|AA|U|1368
6ZM5|1|AA|U|1369
6ZM5|1|AA|U|1370
*
6ZM5|1|AA|A|1382
6ZM5|1|AA|A|1383
6ZM5|1|AA|A|1384
6ZM5|1|AA|C|1385
6ZM5|1|AA|U|1386
6ZM5|1|AA|A|1387
6ZM5|1|AA|C|1388
*
6ZM5|1|AA|G|1418
6ZM5|1|AA|G|1419
6ZM5|1|AA|U|1420
6ZM5|1|AA|G|1421

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial

Chain f

39S ribosomal protein L48, mitochondrial