J3_6ZQB_005
3D structure
- PDB id
- 6ZQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state B2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCG*CUA*UGG
- Length
- 9 nucleotides
- Bulged bases
- 6ZQB|1|D4|C|106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZQB|1|D4|C|105
6ZQB|1|D4|C|106
6ZQB|1|D4|G|111
*
6ZQB|1|D4|C|259
6ZQB|1|D4|U|260
6ZQB|1|D4|A|263
*
6ZQB|1|D4|U|308
6ZQB|1|D4|G|309
6ZQB|1|D4|G|310
Current chains
- Chain D4
- U3 snoRNA
Nearby chains
- Chain CD
- Nucleolar protein 56
- Chain CG
- 13 kDa ribonucleoprotein-associated protein
Coloring options: