J3_6ZSC_017
3D structure
- PDB id
- 6ZSC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUCAG*CGCAAGU*AAAGACG
- Length
- 20 nucleotides
- Bulged bases
- 6ZSC|1|AA|U|1270
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZSC_017 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.5769
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01343.1
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6ZSC|1|AA|C|1268
6ZSC|1|AA|U|1269
6ZSC|1|AA|U|1270
6ZSC|1|AA|C|1271
6ZSC|1|AA|A|1272
6ZSC|1|AA|G|1273
*
6ZSC|1|AA|C|1302
6ZSC|1|AA|G|1303
6ZSC|1|AA|C|1304
6ZSC|1|AA|A|1305
6ZSC|1|AA|A|1306
6ZSC|1|AA|G|1307
6ZSC|1|AA|U|1308
*
6ZSC|1|AA|A|1317
6ZSC|1|AA|A|1318
6ZSC|1|AA|A|1319
6ZSC|1|AA|G|1320
6ZSC|1|AA|A|1321
6ZSC|1|AA|C|1322
6ZSC|1|AA|G|1323
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A1
- 28S ribosomal protein S35, mitochondrial
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
Coloring options: