J3_6ZTJ_014
3D structure
- PDB id
- 6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GC*GCGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZTJ_014 not in the Motif Atlas
- Homologous match to J3_5J7L_036
- Geometric discrepancy: 0.0832
- The information below is about J3_5J7L_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_60031.2
- Basepair signature
- cWW-cWW-cWW-tWH-tSH-F-F
- Number of instances in this motif group
- 7
Unit IDs
6ZTJ|1|BA|G|30
6ZTJ|1|BA|C|31
*
6ZTJ|1|BA|G|474
6ZTJ|1|BA|C|475
6ZTJ|1|BA|G|476
6ZTJ|1|BA|A|477
6ZTJ|1|BA|A|478
6ZTJ|1|BA|A|479
6ZTJ|1|BA|A|480
6ZTJ|1|BA|G|481
*
6ZTJ|1|BA|C|509
6ZTJ|1|BA|C|510
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BR
- 50S ribosomal protein L20
- Chain BT
- 50S ribosomal protein L22
- Chain BV
- 50S ribosomal protein L24
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