3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
UUUAAUUC*GAAGAACCUUAC*GGCUA
Length
25 nucleotides
Bulged bases
6ZTL|1|AA|A|975, 6ZTL|1|AA|G|976, 6ZTL|1|AA|A|978
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6ZTL_007 not in the Motif Atlas
Homologous match to J3_5J7L_006
Geometric discrepancy: 0.1182
The information below is about J3_5J7L_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_83516.4
Basepair signature
cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

6ZTL|1|AA|U|955
6ZTL|1|AA|U|956
6ZTL|1|AA|U|957
6ZTL|1|AA|A|958
6ZTL|1|AA|A|959
6ZTL|1|AA|U|960
6ZTL|1|AA|U|961
6ZTL|1|AA|C|962
*
6ZTL|1|AA|G|973
6ZTL|1|AA|A|974
6ZTL|1|AA|A|975
6ZTL|1|AA|G|976
6ZTL|1|AA|A|977
6ZTL|1|AA|A|978
6ZTL|1|AA|C|979
6ZTL|1|AA|C|980
6ZTL|1|AA|U|981
6ZTL|1|AA|U|982
6ZTL|1|AA|A|983
6ZTL|1|AA|C|984
*
6ZTL|1|AA|G|1221
6ZTL|1|AA|G|1222
6ZTL|1|AA|C|1223
6ZTL|1|AA|U|1224
6ZTL|1|AA|A|1225

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AJ
30S ribosomal protein S10
Chain AM
30S ribosomal protein S13
Chain AN
30S ribosomal protein S14
Chain AS
30S ribosomal protein S19
Chain AX
Transfer RNA; tRNA

Coloring options:


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