J3_6ZTL_018

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZTL_018 not in the Motif Atlas

Homologous match to J3_5J7L_040

Geometric discrepancy: 0.3235

The information below is about J3_5J7L_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28621.5

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

7

Unit IDs

6ZTL|1|BA|G|1055
6ZTL|1|BA|G|1056
6ZTL|1|BA|A|1057
*
6ZTL|1|BA|U|1081
6ZTL|1|BA|U|1082
6ZTL|1|BA|U|1083
6ZTL|1|BA|A|1084
6ZTL|1|BA|A|1085
6ZTL|1|BA|A|1086
6ZTL|1|BA|G|1087
*
6ZTL|1|BA|C|1102
6ZTL|1|BA|A|1103
6ZTL|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B6

50S ribosomal protein L36