J3_6ZTM_018
3D structure
- PDB id
- 6ZTM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in collided state without NusG
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZTM_018 not in the Motif Atlas
- Homologous match to J3_5J7L_040
- Geometric discrepancy: 0.2686
- The information below is about J3_5J7L_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28621.5
- Basepair signature
- cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F
- Number of instances in this motif group
- 7
Unit IDs
6ZTM|1|BA|G|1055
6ZTM|1|BA|G|1056
6ZTM|1|BA|A|1057
*
6ZTM|1|BA|U|1081
6ZTM|1|BA|U|1082
6ZTM|1|BA|U|1083
6ZTM|1|BA|A|1084
6ZTM|1|BA|A|1085
6ZTM|1|BA|A|1086
6ZTM|1|BA|G|1087
*
6ZTM|1|BA|C|1102
6ZTM|1|BA|A|1103
6ZTM|1|BA|C|1104
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B6
- 50S ribosomal protein L36
Coloring options: