J3_6ZU5_002
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGCGGACGCAC*GAC*GGUCU
- Length
- 20 nucleotides
- Bulged bases
- 6ZU5|1|L50|A|64
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZU5_002 not in the Motif Atlas
- Geometric match to J3_4WF9_001
- Geometric discrepancy: 0.3894
- The information below is about J3_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47707.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
6ZU5|1|L50|A|45
6ZU5|1|L50|C|46
6ZU5|1|L50|G|47
6ZU5|1|L50|C|48
6ZU5|1|L50|G|49
6ZU5|1|L50|G|50
6ZU5|1|L50|A|51
6ZU5|1|L50|C|52
6ZU5|1|L50|G|53
6ZU5|1|L50|C|54
6ZU5|1|L50|A|55
6ZU5|1|L50|C|56
*
6ZU5|1|L50|G|63
6ZU5|1|L50|A|64
6ZU5|1|L50|C|65
*
6ZU5|1|L50|G|91
6ZU5|1|L50|G|92
6ZU5|1|L50|U|93
6ZU5|1|L50|C|94
6ZU5|1|L50|U|95
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LHH
- uL29
- Chain LJJ
- eL37
- Chain LLL
- eL39
- Chain LX0
- uL23
Coloring options: