J3_6ZU5_021

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAG*CUAGUAG*CGAAUGAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|S60|C|854
6ZU5|1|S60|A|855
6ZU5|1|S60|A|856
6ZU5|1|S60|G|857
*
6ZU5|1|S60|C|1221
6ZU5|1|S60|U|1222
6ZU5|1|S60|A|1223
6ZU5|1|S60|G|1224
6ZU5|1|S60|U|1225
6ZU5|1|S60|A|1226
6ZU5|1|S60|G|1227
*
6ZU5|1|S60|C|1249
6ZU5|1|S60|G|1250
6ZU5|1|S60|A|1251
6ZU5|1|S60|A|1252
6ZU5|1|S60|U|1253
6ZU5|1|S60|G|1254
6ZU5|1|S60|A|1255
6ZU5|1|S60|G|1256

Current chains

Chain S60

18S rRNA

Nearby chains

Chain SCC

eS28

Chain SF0

uS7

Chain SQ0

uS9