J3_6ZU5_023

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAAUUU*GGGGCAGCUUAC*GGCUG

Length

25 nucleotides

Bulged bases

6ZU5|1|S60|G|892, 6ZU5|1|S60|G|894, 6ZU5|1|S60|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|S60|C|873
6ZU5|1|S60|U|874
6ZU5|1|S60|U|875
6ZU5|1|S60|A|876
6ZU5|1|S60|A|877
6ZU5|1|S60|U|878
6ZU5|1|S60|U|879
6ZU5|1|S60|U|880
*
6ZU5|1|S60|G|891
6ZU5|1|S60|G|892
6ZU5|1|S60|G|893
6ZU5|1|S60|G|894
6ZU5|1|S60|C|895
6ZU5|1|S60|A|896
6ZU5|1|S60|G|897
6ZU5|1|S60|C|898
6ZU5|1|S60|U|899
6ZU5|1|S60|U|900
6ZU5|1|S60|A|901
6ZU5|1|S60|C|902
*
6ZU5|1|S60|G|1111
6ZU5|1|S60|G|1112
6ZU5|1|S60|C|1113
6ZU5|1|S60|U|1114
6ZU5|1|S60|G|1115

Current chains

Chain S60

18S rRNA

Nearby chains

Chain SDD

uS14

Chain SP0

uS19

Chain SS0

uS13

Chain SU0

uS10