J3_6ZU5_024

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCGGAU*AGGG*CAGAUG

Length

16 nucleotides

Bulged bases

6ZU5|1|S60|G|910, 6ZU5|1|S60|G|1102, 6ZU5|1|S60|U|1104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|S60|C|908
6ZU5|1|S60|C|909
6ZU5|1|S60|G|910
6ZU5|1|S60|G|911
6ZU5|1|S60|A|912
6ZU5|1|S60|U|913
*
6ZU5|1|S60|A|953
6ZU5|1|S60|G|954
6ZU5|1|S60|G|955
6ZU5|1|S60|G|956
*
6ZU5|1|S60|C|1100
6ZU5|1|S60|A|1101
6ZU5|1|S60|G|1102
6ZU5|1|S60|A|1103
6ZU5|1|S60|U|1104
6ZU5|1|S60|G|1105

Current chains

Chain S60

18S rRNA

Nearby chains

Chain SK0

eS10