J3_6ZU5_025

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUGCAA*UGAGGCC*GGCGAAA

Length

20 nucleotides

Bulged bases

6ZU5|1|S60|G|975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|S60|U|973
6ZU5|1|S60|U|974
6ZU5|1|S60|G|975
6ZU5|1|S60|C|976
6ZU5|1|S60|A|977
6ZU5|1|S60|A|978
*
6ZU5|1|S60|U|1017
6ZU5|1|S60|G|1018
6ZU5|1|S60|A|1019
6ZU5|1|S60|G|1020
6ZU5|1|S60|G|1021
6ZU5|1|S60|C|1022
6ZU5|1|S60|C|1023
*
6ZU5|1|S60|G|1075
6ZU5|1|S60|G|1076
6ZU5|1|S60|C|1077
6ZU5|1|S60|G|1078
6ZU5|1|S60|A|1079
6ZU5|1|S60|A|1080
6ZU5|1|S60|A|1081

Current chains

Chain S60

18S rRNA

Nearby chains

Chain SC0

uS5

Chain SD0

uS3

Chain SDD

uS14

Chain SQ0

uS9

Chain SR0

eS17

Chain SU0

uS10