J3_6ZU5_030

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCAUGGCAA*UGACAG*CGCAGCGGAGCG

Length

28 nucleotides

Bulged bases

6ZU5|1|L50|C|209, 6ZU5|1|L50|G|213, 6ZU5|1|L50|C|214, 6ZU5|1|L50|C|302, 6ZU5|1|L50|A|305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|L50|C|207
6ZU5|1|L50|G|208
6ZU5|1|L50|C|209
6ZU5|1|L50|A|210
6ZU5|1|L50|U|211
6ZU5|1|L50|G|212
6ZU5|1|L50|G|213
6ZU5|1|L50|C|214
6ZU5|1|L50|A|215
6ZU5|1|L50|A|216
*
6ZU5|1|L50|U|234
6ZU5|1|L50|G|235
6ZU5|1|L50|A|236
6ZU5|1|L50|C|237
6ZU5|1|L50|A|238
6ZU5|1|L50|G|239
*
6ZU5|1|L50|C|297
6ZU5|1|L50|G|298
6ZU5|1|L50|C|299
6ZU5|1|L50|A|300
6ZU5|1|L50|G|301
6ZU5|1|L50|C|302
6ZU5|1|L50|G|303
6ZU5|1|L50|G|304
6ZU5|1|L50|A|305
6ZU5|1|L50|G|306
6ZU5|1|L50|C|307
6ZU5|1|L50|G|308

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LG0

eL8

Chain LHH

uL29

Chain LII

eL36

Chain LL0

eL13

Chain LN0

eL15