J3_6ZVI_018

3D structure

PDB id

6ZVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mbf1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGCAUCA*UAACUACUG*CAUUUGCC

Length

24 nucleotides

Bulged bases

6ZVI|1|h|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVI|1|h|G|878
6ZVI|1|h|G|879
6ZVI|1|h|C|880
6ZVI|1|h|A|881
6ZVI|1|h|U|882
6ZVI|1|h|C|883
6ZVI|1|h|A|884
*
6ZVI|1|h|U|928
6ZVI|1|h|A|929
6ZVI|1|h|A|930
6ZVI|1|h|C|931
6ZVI|1|h|U|932
6ZVI|1|h|A|933
6ZVI|1|h|C|934
6ZVI|1|h|U|935
6ZVI|1|h|G|936
*
6ZVI|1|h|C|943
6ZVI|1|h|A|944
6ZVI|1|h|U|945
6ZVI|1|h|U|946
6ZVI|1|h|U|947
6ZVI|1|h|G|948
6ZVI|1|h|C|949
6ZVI|1|h|C|950

Current chains

Chain h

18S rRNA

Nearby chains

Chain K

RPS26B isoform 1

Chain j

RPS1A isoform 1

Chain v

40S ribosomal protein S13

Chain w

40S ribosomal protein S14-B