J3_7A0S_007

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CAAG*CGCAAAC*GUG

Length

14 nucleotides

Bulged bases

7A0S|1|X|A|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_71677.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7A0S|1|X|C|1319
7A0S|1|X|A|1320
7A0S|1|X|A|1321
7A0S|1|X|G|1322
*
7A0S|1|X|C|1621
7A0S|1|X|G|1622
7A0S|1|X|C|1623
7A0S|1|X|A|1624
7A0S|1|X|A|1625
7A0S|1|X|A|1626
7A0S|1|X|C|1627
*
7A0S|1|X|G|1636
7A0S|1|X|U|1637
7A0S|1|X|G|1638

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain 2

50S ribosomal protein L34