J3_7A0S_009

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UUG*CUAAC*GGACCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_89368.5

Basepair signature

cWW-tSH-tHW-F-cWW-tHH-cWW

Number of instances in this motif group

3

Unit IDs

7A0S|1|X|U|2074
7A0S|1|X|U|2075
7A0S|1|X|G|2076
*
7A0S|1|X|C|2179
7A0S|1|X|U|2180
7A0S|1|X|A|2181
7A0S|1|X|A|2182
7A0S|1|X|C|2183
*
7A0S|1|X|G|2202
7A0S|1|X|G|2203
7A0S|1|X|A|2204
7A0S|1|X|C|2205
7A0S|1|X|C|2206
7A0S|1|X|G|2207

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2

Chain U

50S ribosomal protein L28