J3_7A0S_011

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

7A0S|1|X|A|2497, 7A0S|1|X|U|2498

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7A0S|1|X|C|2496
7A0S|1|X|A|2497
7A0S|1|X|U|2498
7A0S|1|X|C|2499
*
7A0S|1|X|G|2524
7A0S|1|X|U|2525
7A0S|1|X|U|2526
*
7A0S|1|X|A|2540
7A0S|1|X|U|2541
7A0S|1|X|U|2542
7A0S|1|X|A|2543
7A0S|1|X|A|2544
7A0S|1|X|A|2545
7A0S|1|X|G|2546

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain H

50S ribosomal protein L14