J3_7A0S_013

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UC*GUUAAG*CAUCA

Length

13 nucleotides

Bulged bases

7A0S|1|X|U|2808, 7A0S|1|X|A|2810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76911.2

Basepair signature

cWW-tHS-F-F-F-cWW-cWW

Number of instances in this motif group

4

Unit IDs

7A0S|1|X|U|2789
7A0S|1|X|C|2790
*
7A0S|1|X|G|2806
7A0S|1|X|U|2807
7A0S|1|X|U|2808
7A0S|1|X|A|2809
7A0S|1|X|A|2810
7A0S|1|X|G|2811
*
7A0S|1|X|C|2857
7A0S|1|X|A|2858
7A0S|1|X|U|2859
7A0S|1|X|C|2860
7A0S|1|X|A|2861

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain B

50S ribosomal protein L3

Chain K

50S ribosomal protein L17

Chain M

50S ribosomal protein L19

Chain Z

50S ribosomal protein L32