J3_7A5F_010
3D structure
- PDB id
- 7A5F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- AGGA*UAC*GGAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7A5F_010 not in the Motif Atlas
- Homologous match to J3_5J7L_005
- Geometric discrepancy: 0.1446
- The information below is about J3_5J7L_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7A5F|1|A6|A|1202
7A5F|1|A6|G|1203
7A5F|1|A6|G|1204
7A5F|1|A6|A|1205
*
7A5F|1|A6|U|1368
7A5F|1|A6|A|1369
7A5F|1|A6|C|1370
*
7A5F|1|A6|G|1425
7A5F|1|A6|G|1426
7A5F|1|A6|A|1427
7A5F|1|A6|U|1428
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain 24
- Transfer RNA; tRNA
- Chain C
- Transfer RNA; tRNA
- Chain F6
- 28S ribosomal protein S7, mitochondrial
- Chain G6
- 28S ribosomal protein S9, mitochondrial
Coloring options: