3D structure

PDB id
7A5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CGAGCUA*UAG*CGAG
Length
14 nucleotides
Bulged bases
7A5H|1|A|G|1918
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7A5H_002 not in the Motif Atlas
Homologous match to J3_4WF9_002
Geometric discrepancy: 0.1026
The information below is about J3_4WF9_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46658.1
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
10

Unit IDs

7A5H|1|A|C|1915
7A5H|1|A|G|1916
7A5H|1|A|A|1917
7A5H|1|A|G|1918
7A5H|1|A|C|1919
7A5H|1|A|U|1920
7A5H|1|A|A|1921
*
7A5H|1|A|U|1983
7A5H|1|A|A|1984
7A5H|1|A|G|1985
*
7A5H|1|A|C|2001
7A5H|1|A|G|2002
7A5H|1|A|A|2003
7A5H|1|A|G|2004

Current chains

Chain A
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial

Coloring options:


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