J3_7A5I_017
3D structure
- PDB id
- 7A5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUCAG*CGCAAGU*AAAGACG
- Length
- 20 nucleotides
- Bulged bases
- 7A5I|1|A6|U|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7A5I_017 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.5942
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01343.1
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7A5I|1|A6|C|1272
7A5I|1|A6|U|1273
7A5I|1|A6|U|1274
7A5I|1|A6|C|1275
7A5I|1|A6|A|1276
7A5I|1|A6|G|1277
*
7A5I|1|A6|C|1306
7A5I|1|A6|G|1307
7A5I|1|A6|C|1308
7A5I|1|A6|A|1309
7A5I|1|A6|A|1310
7A5I|1|A6|G|1311
7A5I|1|A6|U|1312
*
7A5I|1|A6|A|1321
7A5I|1|A6|A|1322
7A5I|1|A6|A|1323
7A5I|1|A6|G|1324
7A5I|1|A6|A|1325
7A5I|1|A6|C|1326
7A5I|1|A6|G|1327
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain C6
- 28S ribosomal protein S24, mitochondrial
- Chain D6
- 28S ribosomal protein S5, mitochondrial
- Chain G6
- 28S ribosomal protein S9, mitochondrial
- Chain H6
- 28S ribosomal protein S10, mitochondrial
- Chain K6
- 28S ribosomal protein S14, mitochondrial
- Chain b6
- 28S ribosomal protein S35, mitochondrial
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