J3_7A5K_005

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

7A5K|1|A3|A|3005, 7A5K|1|A3|U|3006

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7A5K_005 not in the Motif Atlas

Homologous match to J3_7RQB_012

Geometric discrepancy: 0.1072

The information below is about J3_7RQB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.3

Basepair signature

cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW

Number of instances in this motif group

4

Unit IDs

7A5K|1|A3|C|3004
7A5K|1|A3|A|3005
7A5K|1|A3|U|3006
7A5K|1|A3|C|3007
*
7A5K|1|A3|G|3032
7A5K|1|A3|U|3033
7A5K|1|A3|U|3034
*
7A5K|1|A3|A|3048
7A5K|1|A3|U|3049
7A5K|1|A3|U|3050
7A5K|1|A3|A|3051
7A5K|1|A3|A|3052
7A5K|1|A3|A|3053
7A5K|1|A3|G|3054

Current chains

Chain A3

16S rRNA

Nearby chains

Chain E3

39S ribosomal protein L3, mitochondrial

Chain L3

39S ribosomal protein L14, mitochondrial

Chain r3

39S ribosomal protein S18a, mitochondrial