J3_7ABZ_025

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

CAAUGG*CGUAGUCC*GUCG

Length

18 nucleotides

Bulged bases

7ABZ|1|2|U|1240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|2|C|1237
7ABZ|1|2|A|1238
7ABZ|1|2|A|1239
7ABZ|1|2|U|1240
7ABZ|1|2|G|1241
7ABZ|1|2|G|1242
*
7ABZ|1|2|C|1296
7ABZ|1|2|G|1297
7ABZ|1|2|U|1298
7ABZ|1|2|A|1299
7ABZ|1|2|G|1300
7ABZ|1|2|U|1301
7ABZ|1|2|C|1302
7ABZ|1|2|C|1303
*
7ABZ|1|2|G|1334
7ABZ|1|2|U|1335
7ABZ|1|2|C|1336
7ABZ|1|2|G|1337

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S7

Chain r

30S ribosomal protein S13