J3_7ABZ_028

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

UCGACC*GAAACA*UGUA

Length

16 nucleotides

Bulged bases

7ABZ|1|1|A|1383, 7ABZ|1|1|A|1384

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|1|U|1344
7ABZ|1|1|C|1345
7ABZ|1|1|G|1346
7ABZ|1|1|A|1347
7ABZ|1|1|C|1348
7ABZ|1|1|C|1349
*
7ABZ|1|1|G|1382
7ABZ|1|1|A|1383
7ABZ|1|1|A|1384
7ABZ|1|1|A|1385
7ABZ|1|1|C|1386
7ABZ|1|1|A|1387
*
7ABZ|1|1|U|1400
7ABZ|1|1|G|1401
7ABZ|1|1|U|1402
7ABZ|1|1|A|1403

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23