J3_7ABZ_034

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

CUUGACAUCC*GAGACAGG*CCUUACG

Length

25 nucleotides

Bulged bases

7ABZ|1|2|A|994, 7ABZ|1|2|C|995, 7ABZ|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|2|C|990
7ABZ|1|2|U|991
7ABZ|1|2|U|992
7ABZ|1|2|G|993
7ABZ|1|2|A|994
7ABZ|1|2|C|995
7ABZ|1|2|A|996
7ABZ|1|2|U|997
7ABZ|1|2|C|998
7ABZ|1|2|C|999
*
7ABZ|1|2|G|1041
7ABZ|1|2|A|1042
7ABZ|1|2|G|1043
7ABZ|1|2|A|1044
7ABZ|1|2|C|1045
7ABZ|1|2|A|1046
7ABZ|1|2|G|1047
7ABZ|1|2|G|1048
*
7ABZ|1|2|C|1209
7ABZ|1|2|C|1210
7ABZ|1|2|U|1211
7ABZ|1|2|U|1212
7ABZ|1|2|A|1213
7ABZ|1|2|C|1214
7ABZ|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 5

SsrA-binding protein

Chain s

30S ribosomal protein S14