J3_7ABZ_036

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

UAU*AGACUGC*GAGGAAGGUG

Length

20 nucleotides

Bulged bases

7ABZ|1|2|U|1159, 7ABZ|1|2|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|2|U|1116
7ABZ|1|2|A|1117
7ABZ|1|2|U|1118
*
7ABZ|1|2|A|1155
7ABZ|1|2|G|1156
7ABZ|1|2|A|1157
7ABZ|1|2|C|1158
7ABZ|1|2|U|1159
7ABZ|1|2|G|1160
7ABZ|1|2|C|1161
*
7ABZ|1|2|G|1175
7ABZ|1|2|A|1176
7ABZ|1|2|G|1177
7ABZ|1|2|G|1178
7ABZ|1|2|A|1179
7ABZ|1|2|A|1180
7ABZ|1|2|G|1181
7ABZ|1|2|G|1182
7ABZ|1|2|U|1183
7ABZ|1|2|G|1184

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain n

30S ribosomal protein S9

Chain o

30S ribosomal protein S10

Chain s

30S ribosomal protein S14