J3_7ABZ_037
3D structure
- PDB id
- 7ABZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- GAUUCUGGAUUCGACG*CGGACG*CC
- Length
- 24 nucleotides
- Bulged bases
- 7ABZ|1|4|U|10, 7ABZ|1|4|C|11, 7ABZ|1|4|U|12, 7ABZ|1|4|G|13, 7ABZ|1|4|G|14, 7ABZ|1|4|A|15, 7ABZ|1|4|U|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ABZ|1|4|G|7
7ABZ|1|4|A|8
7ABZ|1|4|U|9
7ABZ|1|4|U|10
7ABZ|1|4|C|11
7ABZ|1|4|U|12
7ABZ|1|4|G|13
7ABZ|1|4|G|14
7ABZ|1|4|A|15
7ABZ|1|4|U|16
7ABZ|1|4|U|17
7ABZ|1|4|C|18
7ABZ|1|4|G|19
7ABZ|1|4|A|20
7ABZ|1|4|C|21
7ABZ|1|4|G|22
*
7ABZ|1|4|C|331
7ABZ|1|4|G|332
7ABZ|1|4|G|333
7ABZ|1|4|A|334
7ABZ|1|4|C|335
7ABZ|1|4|G|336
*
7ABZ|1|4|C|352
7ABZ|1|4|C|353
Current chains
- Chain 4
- transfer-messenger RNA (tmRNA)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 5
- SsrA-binding protein
- Chain 6
- Elongation factor Tu 2
Coloring options: