J3_7AC7_019
3D structure
- PDB id
- 7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7AC7|1|2|A|975, 7AC7|1|2|G|976, 7AC7|1|2|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AC7_019 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.1161
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7AC7|1|2|U|955
7AC7|1|2|U|956
7AC7|1|2|U|957
7AC7|1|2|A|958
7AC7|1|2|A|959
7AC7|1|2|U|960
7AC7|1|2|U|961
7AC7|1|2|C|962
*
7AC7|1|2|G|973
7AC7|1|2|A|974
7AC7|1|2|A|975
7AC7|1|2|G|976
7AC7|1|2|A|977
7AC7|1|2|A|978
7AC7|1|2|C|979
7AC7|1|2|C|980
7AC7|1|2|U|981
7AC7|1|2|U|982
7AC7|1|2|A|983
7AC7|1|2|C|984
*
7AC7|1|2|G|1221
7AC7|1|2|G|1222
7AC7|1|2|C|1223
7AC7|1|2|U|1224
7AC7|1|2|A|1225
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 4
- Transfer-messenger RNA; tmRNA
- Chain 5
- SsrA-binding protein
- Chain n
- 30S ribosomal protein S9
- Chain o
- 30S ribosomal protein S10
- Chain r
- 30S ribosomal protein S13
- Chain s
- 30S ribosomal protein S14
- Chain x
- 30S ribosomal protein S19
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